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Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs438957 chr20:44364989 A/G WFDC3 chr20:44376583-44420571:- 0.87 6.45 3.77E-8 Box Plot
ACC rs4410294 chr2:88450605 A/G THNSL2 chr2:88469814-88486155:+ 0.82 6.48 3.37E-8 Box Plot
ACC rs4415243 chr7:76016979 A/C UPK3B chr7:76139745-76145838:+ 0.73 5.79 4.11E-7 Box Plot
ACC rs441890 chr8:71564667 C/T XKR9 chr8:71581600-71702606:+ 0.68 6.72 1.38E-8 Box Plot
ACC rs4419647 chr6:86225739 T/C SNHG5 chr6:86370668-86388454:- 0.68 5.09 4.95E-6 Box Plot
ACC rs4431401 chr6:86189520 A/G SNHG5 chr6:86370668-86388454:- 0.74 8.43 2.72E-11 Box Plot
ACC rs4441928 chr6:86241894 T/C SNHG5 chr6:86370668-86388454:- 0.7 5.39 1.72E-6 Box Plot
ACC rs4458211 chr2:88459592 A/G THNSL2 chr2:88469814-88486155:+ 0.82 6.48 3.37E-8 Box Plot
ACC rs4481471 chr7:64470807 C/T INTS4L1 chr7:64601603-64694600:+ 0.71 5.2 3.36E-6 Box Plot
ACC rs4483614 chr11:74525852 T/C XRRA1 chr11:74518784-74660245:- 0.74 5.73 5.15E-7 Box Plot
ACC rs4494538 chr16:50373272 C/T CYLD chr16:50775961-50835846:+ 0.56 5.22 3.13E-6 Box Plot
ACC rs451751 chr20:44365626 G/A WFDC3 chr20:44376583-44420571:- 0.87 6.45 3.77E-8 Box Plot
ACC rs453012 chr20:44364595 G/A WFDC3 chr20:44376583-44420571:- 0.86 6.08 1.46E-7 Box Plot
ACC rs453433 chr20:44389346 A/G WFDC3 chr20:44376583-44420571:- 0.93 7.1 3.46E-9 Box Plot
ACC rs454402 chr20:44374747 C/T WFDC3 chr20:44376583-44420571:- 0.87 6.45 3.77E-8 Box Plot